Montauk Branch
Montauk-Speonk-Patchogue-Jamaica
| Direction | Numbers | Odd/Even | Days of Operation |
|---|---|---|---|
| Inbound Montauk-Babylon or Jamaica | 2701-2711 | odd | Weekdays |
| Outbound Jamaica or Babylon-Montauk | 2702-2720 | even | Weekdays |
| Inbound Speonk-Babylon or Jamaica | 2731-2747 | odd | Weekdays |
| Outbound Jamaica or Babylon-Speonk | 2732-2740 | even | Weekdays |
| Inbound Patchogue-Babylon or Jamaica | 2761-2781 | odd | Weekdays |
| Outbound Jamaica or Babylon-Patchogue | 2762-2782 | even | Weekdays |
| Inbound Montauk-Jamaica | 8701-8713 | odd | Weekends |
| Outbound Jamaica-Montauk | 8700-8712 | even | Weekends |
| Inbound Speonk-Babylon or Jamaica | 8731-8741 | odd | Weekends |
| Outbound Jamaica or Babylon-Speonk | 8732-8742 | even | Weekends |
| Inbound Patchogue-Babylon or Jamaica | 8761-8773 | odd | Weekends |
| Outbound Jamaica or Babylon-Patchogue | 8764-8774 | even | Weekends |
Babylon Branch
Babylon-Jamaica-Brooklyn or Penn Station
| Direction | Numbers | Odd/Even | Days of Operation |
|---|---|---|---|
| Inbound Babylon-Brooklyn or Penn Station | 3-163 | odd | Weekdays |
| Outbound Penn Station or Brooklyn-Babylon | 2-198 | even | Weekdays |
| Inbound Massapequa Park or Wantaugh-Brooklyn or Penn Station | 1001-1099 | odd | Weekdays |
| Outbound Brooklyn or Penn Station-Wantaugh or Massapequa Park | 1050-1066 | even | Weekdays |
| Inbound Freeport-Penn Station | 1101-1107 | odd | Weekdays |
| Outbound Penn Station-Freeport | 1150-1158 | even | Weekdays |
| Inbound Babylon-Penn Station | 6001-6153 | odd | Weekends |
| Outbound Penn Station-Babylon | 6000-6148 | even | Weekends |
Ronkonkoma Branch
Greenport-Ronkonkoma-Penn Station
| Direction | Numbers | Odd/Even | Days of Operation |
|---|---|---|---|
| Inbound Ronkonkoma-Penn Station | 2001-2073 | odd | Weekdays |
| Outbound Penn Station-Ronkonkoma | 2000-2098 | even | Weekdays |
| Inbound Greenport or Riverhead-Ronkonkoma | 201-253 | odd | Weekdays |
| Outbound Ronkonkoma-Yaphank or Riverhead or Greenport | 200-256 | even | Weekdays |
| Inbound Greenport-Ronkonkoma | 6201-6203 | odd | Weekends |
| Outbound Ronkonkoma-Greenport | 6200-6202 | even | Weekends |
| Inbound Ronkonkoma-Penn Station | 8001-8073 | odd | Weekends |
| Outbound Penn Station-Ronkonkoma | 8000-8072 | even | Weekends |
Port Jefferson Branch
Port Jefferson-Huntington-Hicksville-Jamaica-Penn Station
| Direction | Numbers | Odd/Even | Days of Operation |
|---|---|---|---|
| Inbound Port Jefferson-Huntington or Hicksville or Jamaica | 601-665 | odd | Weekdays |
| Outbound Jamaica or Hicksville or Huntington-Port Jefferson | 600-676 | even | Weekdays |
| Inbound Huntington-Penn Station | 1601-1729 | odd | Weekdays |
| Outbound Penn Station-Huntington | 1602-1752 | even | Weekdays |
| Inbound Port Jefferson-Huntington or Hicksville or Jamaica | 6601-6665 | odd | Weekends |
| Outbound Jamaica or Hicksville or Huntington-Port Jefferson | 6600-6666 | even | Weekends |
| Inbound Huntington-Penn Station | 7601-7747 | odd | Weekends |
| Outbound Penn Station-Huntington | 7602-7744 | even | Weekends |
Oyster Bay Branch
Oyster Bay-Mineola-Jamaica
| Direction | Numbers | Odd/Even | Days of Operation |
|---|---|---|---|
| Inbound Oyster Bay-Mineola or Jamaica or Hunterspoint Avenue | 501-565 | odd | Weekdays |
| Outbound Hunterspoint Avenue or Jamaica or Mineola-Oyster Bay | 500-574 | even | Weekdays |
| Inbound East Williston-Jamaica | 1501 | odd | Weekdays |
| Inbound Oyster Bay-Jamaica | 6501-6565 | odd | Weekends |
| Outbound Jamaica-Oyster Bay | 6500-6562 | even | Weekends |
Hempstead Branch
Hempstead-Brooklyn or Penn Station
| Direction | Numbers | Odd/Even | Days of Operation |
|---|---|---|---|
| Inbound Hempstead-Brooklyn or Penn Station | 701-799 | odd | Weekdays |
| Outbound Penn Station or Brooklyn-Hempstead | 700-798 | even | Weekdays |
| Inbound Hempstead-Brooklyn | 6701-6773 | odd | Weekends |
| Outbound Brooklyn-Hempstead | 6700-6772 | even | Weekends |
West Hempstead Branch
West Hempstead-Brooklyn or Penn Station
| Direction | Numbers | Odd/Even | Days of Operation |
|---|---|---|---|
| Inbound West Hempstead-Valley Stream or Brooklyn or Penn Station | 901-963 | odd | Weekdays |
| Outbound Brooklyn or Valley Stream-West Hempstead | 900-972 | even | Weekdays |
| Inbound West Hempstead-Valley Stream | 6901-6961 | odd | Weekends |
| Outbound Valley Stream-West Hempstead | 6900-6960 | even | Weekends |
Long Beach Branch
Long Beach-Brooklyn or Penn Station
| Direction | Numbers | Odd/Even | Days of Operation |
|---|---|---|---|
| Inbound Long Beach-Brooklyn or Penn Station | 801-879 | odd | Weekdays |
| Outbound Penn Station or Brooklyn-Long Beach | 802-898 | even | Weekdays |
| Inbound Long Beach-Brooklyn or Penn Station | 6801-6879 | odd | Weekends |
| Outbound Penn Station or Brooklyn-Long Beach | 6800-6872 | even | Weekends |
Far Rockaway Branch
Far Rockaway-Brooklyn or Penn Station
| Direction | Numbers | Odd/Even | Days of Operation |
|---|---|---|---|
| Inbound Far Rockaway-Brooklyn or Penn Station | 2801-2877 | odd | Weekdays |
| Outbound Penn Station or Brooklyn-Far Rockaway | 2800-2886 | even | Weekdays |
| Inbound Far Rockaway-Valley Stream or Brooklyn | 8801-8873 | odd | Weekends |
| Outbound Brooklyn or Valley Stream-Far Rockaway | 8800-8872 | even | Weekends |
Port Washington Branch
Port Washington-Penn Station
| Direction | Numbers | Odd/Even | Days of Operation |
|---|---|---|---|
| Inbound Great Neck or Little Neck-Penn Station | 301-355 | odd | Weekdays |
| Outbound Penn Station-Great Neck | 300-398 | even | Weekdays |
| Inbound Port Washington-Penn Station | 401-485 | odd | Weekdays |
| Outbound Penn Station-Port Washington | 400-480 | even | Weekdays |
| Inbound Port Washington-Penn Station | 6401-6497 | odd | Weekends |
| Outbound Penn Station-Port Washington | 6400-6494 | even | Weekends |